DocumentCode
2988035
Title
A first step toward chromosome analysis by compression algorithms
Author
Rivals, E. ; Delahaye, J.-P. ; Dauchet, M. ; Delgrange, O.
Author_Institution
LIFL, Lille I Univ., Villeneuve d´´Ascq, France
fYear
1995
fDate
29-31 May 1995
Firstpage
233
Lastpage
239
Abstract
The authors use Kolmogorov complexity and compression algorithms to study DOS-DNA (DOS: defined ordered sequence). This approach gives quantitative and qualitative explanations of the regularities of apparently regular regions. The authors present the problem of the coding of approximate multiple tandem repeats in order to obtain compression. Then the authors describe an algorithm that allows one to find efficiently approximate multiple tandem repeats. Finally, the authors briefly describe some of their results
Keywords
DNA; biology computing; computational complexity; data compression; molecular biophysics; pattern matching; sequences; DOS-DNA; Kolmogorov complexity; approximate multiple tandem repeats; chromosome analysis; compression algorithms; defined order sequence DNA; Algorithm design and analysis; Bioinformatics; Biological cells; Compression algorithms; DNA; Diseases; Genomics; Humans; Sequences; Systematics;
fLanguage
English
Publisher
ieee
Conference_Titel
Intelligence in Neural and Biological Systems, 1995. INBS'95, Proceedings., First International Symposium on
Conference_Location
Herndon, VA
Print_ISBN
0-8186-7116-5
Type
conf
DOI
10.1109/INBS.1995.404256
Filename
404256
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