• DocumentCode
    2988035
  • Title

    A first step toward chromosome analysis by compression algorithms

  • Author

    Rivals, E. ; Delahaye, J.-P. ; Dauchet, M. ; Delgrange, O.

  • Author_Institution
    LIFL, Lille I Univ., Villeneuve d´´Ascq, France
  • fYear
    1995
  • fDate
    29-31 May 1995
  • Firstpage
    233
  • Lastpage
    239
  • Abstract
    The authors use Kolmogorov complexity and compression algorithms to study DOS-DNA (DOS: defined ordered sequence). This approach gives quantitative and qualitative explanations of the regularities of apparently regular regions. The authors present the problem of the coding of approximate multiple tandem repeats in order to obtain compression. Then the authors describe an algorithm that allows one to find efficiently approximate multiple tandem repeats. Finally, the authors briefly describe some of their results
  • Keywords
    DNA; biology computing; computational complexity; data compression; molecular biophysics; pattern matching; sequences; DOS-DNA; Kolmogorov complexity; approximate multiple tandem repeats; chromosome analysis; compression algorithms; defined order sequence DNA; Algorithm design and analysis; Bioinformatics; Biological cells; Compression algorithms; DNA; Diseases; Genomics; Humans; Sequences; Systematics;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Intelligence in Neural and Biological Systems, 1995. INBS'95, Proceedings., First International Symposium on
  • Conference_Location
    Herndon, VA
  • Print_ISBN
    0-8186-7116-5
  • Type

    conf

  • DOI
    10.1109/INBS.1995.404256
  • Filename
    404256