DocumentCode
2997466
Title
An in-silico approach for drug repositioning to tumour anti-migration using an integrated genomic strategy
Author
Mao, Yong ; Cui, Kemi ; Lulu, Wang ; Zhao, Hong ; Nie, Fang ; Brandl, Miriam ; Beck, Dominik ; Gao, Liang ; Wong, Stephen
Author_Institution
Bioeng. & Bioinf. Program, Weill Cornell Med. Coll., Houston, TX, USA
fYear
2011
fDate
7-8 April 2011
Firstpage
88
Lastpage
91
Abstract
Cell migration is a key step for deterioration of many in situ or metastasis malignant tumours. Tumour anti-migration is a promising strategy to treat cancer, but corresponding drugs developed under such a strategy are still in dire poverty, partly due to the lengthly process of drug trials and approval required by the US Food and Drug Administration (FDA). Given there are thousands of FDA approved drugs in the market, we believe that drug repositioning may provide a fast and cost-effective way to identify potential anti-migration drugs. In this paper, an in-silico drug screening method using a genomic strategy is proposed for the goal, in which genomic signature identification combined with support vector machine modelling is adopted to estimate drug efficacy. And a high-throughput, sensitive, 3-dimensional invasion assay by quantitative bioluminescence imaging proved the performance of proposed method on in vitro disease models.
Keywords
biological techniques; bioluminescence; biomedical measurement; cancer; drugs; genetic algorithms; medical computing; support vector machines; tumours; 3D invasion assay; cancer treatment; cell migration; drug efficacy estimation; drug repositioning; in silico approach; in silico drug screening method; in vitro disease models; integrated genomic strategy; metastatic malignant tumour deterioration; quantitative bioluminescence imaging; support vector machine modelling; tumour antimigration; Bioinformatics; Cancer; Diseases; Drugs; In vitro; Support vector machines; Tumors;
fLanguage
English
Publisher
ieee
Conference_Titel
Life Science Systems and Applications Workshop (LiSSA), 2011 IEEE/NIH
Conference_Location
Bethesda, MD
Print_ISBN
978-1-4577-0421-5
Type
conf
DOI
10.1109/LISSA.2011.5754163
Filename
5754163
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