• DocumentCode
    3034361
  • Title

    Simulation of oscillatory dynamics of blood testosterone levels using the crossover method

  • Author

    Sabnis, Amit ; Harrison, Robert W.

  • Author_Institution
    Dept. of Biol., Georgia State Univ., Atlanta, GA, USA
  • fYear
    2010
  • fDate
    2-5 May 2010
  • Firstpage
    1
  • Lastpage
    6
  • Abstract
    Blood testosterone levels oscillate periodically in humans. The in vivo dynamics of this biochemical system cannot be simulated in silico using a continuous deterministic solution of a previously reported mathematical model. The use of the stochastic simulation algorithm (SSA), however, has been reported to generate sustained oscillations that are qualitatively and quantitatively consistent with the experimental observations. Although the SSA is capable of accurately simulating a biochemical network, it is extremely inefficient from a computational standpoint. In this work, we have attempted to simulate the above mentioned model using a deterministic-stochastic crossover method, for three separate sets of parameters. Each time, not only did the results show the existence of sustained oscillations but also that the computational time was at least four times lower than the corresponding SSA solution. The crossover method can hence be proposed as a viable alternative to the SSA for simulating biochemical systems that are commonly encountered in systems biology applications.
  • Keywords
    biology computing; blood; mathematical analysis; stochastic processes; SSA; biochemical network; biochemical system; biology applications; blood testosterone levels; computational standpoint; crossover method; mathematical model; oscillatory dynamic simulation; stochastic simulation algorithm; Biological system modeling; Biology computing; Blood; Computational modeling; Computer networks; Humans; In vivo; Mathematical model; Stochastic processes; Testing;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Computational Intelligence in Bioinformatics and Computational Biology (CIBCB), 2010 IEEE Symposium on
  • Conference_Location
    Montreal, QC
  • Print_ISBN
    978-1-4244-6766-2
  • Type

    conf

  • DOI
    10.1109/CIBCB.2010.5510490
  • Filename
    5510490