• DocumentCode
    3036782
  • Title

    Comparative study of feature selection methods on microarray data

  • Author

    Miyamoto, Takanobu ; Uchimura, Shunji ; Hamamoto, Yoshihiko ; Iizuka, Norio ; Oka, Masaaki ; Yamada-Okabe, Hisafumi

  • Author_Institution
    Dept. of Comput. Sci. & Syst. Eng., Yamaguchi Univ., Japan
  • fYear
    2003
  • fDate
    20-22 Oct. 2003
  • Firstpage
    82
  • Lastpage
    83
  • Abstract
    It is difficult to apply usual statistical pattern recognition techniques directly to microarray data, because the number of genes is too large in comparison with the number of available training samples. Therefore, one needs a powerful feature selection method for microarray data. In this paper, we compare the previously published feature selection method with the sequential forward selection (SFS) method and the Fisher criterion-based feature selection method on the microarray data of hepatocellular carcinoma (http://surgery2.med.yamaguchi-u.ac.jp/research/DNAchip/). Experimental results show that our method outperforms the SFS method and the Fisher criterion-based method in terms of the recognition rate.
  • Keywords
    biology computing; cancer; cellular biophysics; genetics; liver; pattern recognition; statistical analysis; Fisher criterion-based feature selection; feature selection methods; genes; hepatocellular carcinoma; microarray data; sequential forward selection; statistical pattern recognition; supervised statistical pattern recognition; Computer science; Costs; Covariance matrix; Data engineering; Error analysis; Euclidean distance; Laboratories; Pattern recognition; Surgery; Systems engineering and theory;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Biomedical Engineering, 2003. IEEE EMBS Asian-Pacific Conference on
  • Print_ISBN
    0-7803-7943-8
  • Type

    conf

  • DOI
    10.1109/APBME.2003.1302594
  • Filename
    1302594