DocumentCode
3036782
Title
Comparative study of feature selection methods on microarray data
Author
Miyamoto, Takanobu ; Uchimura, Shunji ; Hamamoto, Yoshihiko ; Iizuka, Norio ; Oka, Masaaki ; Yamada-Okabe, Hisafumi
Author_Institution
Dept. of Comput. Sci. & Syst. Eng., Yamaguchi Univ., Japan
fYear
2003
fDate
20-22 Oct. 2003
Firstpage
82
Lastpage
83
Abstract
It is difficult to apply usual statistical pattern recognition techniques directly to microarray data, because the number of genes is too large in comparison with the number of available training samples. Therefore, one needs a powerful feature selection method for microarray data. In this paper, we compare the previously published feature selection method with the sequential forward selection (SFS) method and the Fisher criterion-based feature selection method on the microarray data of hepatocellular carcinoma (http://surgery2.med.yamaguchi-u.ac.jp/research/DNAchip/). Experimental results show that our method outperforms the SFS method and the Fisher criterion-based method in terms of the recognition rate.
Keywords
biology computing; cancer; cellular biophysics; genetics; liver; pattern recognition; statistical analysis; Fisher criterion-based feature selection; feature selection methods; genes; hepatocellular carcinoma; microarray data; sequential forward selection; statistical pattern recognition; supervised statistical pattern recognition; Computer science; Costs; Covariance matrix; Data engineering; Error analysis; Euclidean distance; Laboratories; Pattern recognition; Surgery; Systems engineering and theory;
fLanguage
English
Publisher
ieee
Conference_Titel
Biomedical Engineering, 2003. IEEE EMBS Asian-Pacific Conference on
Print_ISBN
0-7803-7943-8
Type
conf
DOI
10.1109/APBME.2003.1302594
Filename
1302594
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