• DocumentCode
    3063034
  • Title

    Computational Neuroscience as a Service: Porting MIIND to the Cloud

  • Author

    Gerckens, Björn-Ole ; Djemame, Karim ; De Kamps, Marc

  • Author_Institution
    Sch. of Comput., Univ. of Leeds, Leeds, UK
  • fYear
    2011
  • fDate
    Nov. 29 2011-Dec. 1 2011
  • Firstpage
    24
  • Lastpage
    31
  • Abstract
    In this paper, we investigate how cloud computing could benefit computational neuroscience. To that end, Multiple Interacting Instantiations of Neuronal Dynamics (MIIND), a computational neuroscience modelling toolkit, was ported to a private, university-owned cloud. The aim was to pave the way for making MIIND more accessible to non-specialist users in virtue of concealing its implementation context as well as rendering local IT infrastructure unnecessary. For that purpose, a customisable MIIND-based workflow model was encased within a virtualised wrapping apparatus. This served to fully automate running configurable MIIND simulations remotely via a convenient web-interface in a transparent manner with the user being incognisant of the cloud and the service orientated architecture behind it. This architecture can be adopted for any application conforming to the workflow characteristics of MIIND and helps inform the porting process of serial and legacy applications.
  • Keywords
    cloud computing; neural nets; neurophysiology; service-oriented architecture; user interfaces; Web-interface; cloud computing; computational neuroscience modelling toolkit; configurable MIIND simulations; customisable MIIND-based workflow model; implementation context; legacy applications; local IT infrastructure; multiple interacting instantiations of neuronal dynamics; nonspecialist users; porting process; private cloud; serial applications; service orientated architecture; university-owned cloud; virtualised wrapping apparatus; workflow characteristics; Cloud computing; Computational modeling; Computer architecture; Data models; Instruction sets; Java; Virtual machining; Bioinformatics; Cloud Computing; Computational Biology; Computational Neuroscience; Distributed Computing; Legacy Application; MIIND; Neuroinformatics; OpenNebula; Private Cloud; Serial Application; e-Science;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Cloud Computing Technology and Science (CloudCom), 2011 IEEE Third International Conference on
  • Conference_Location
    Athens
  • Print_ISBN
    978-1-4673-0090-2
  • Type

    conf

  • DOI
    10.1109/CloudCom.2011.14
  • Filename
    6133123