• DocumentCode
    3071963
  • Title

    An Improved Method for Clustering Gene Microarray Data Based on Intra-Cluster Distance and Variance

  • Author

    Bhattacharjee, Kasturi ; Chatterjee, Soumyadeep ; Konar, Amit ; Janarthanan, R.

  • Author_Institution
    Dept. of Electron. & Telecommun. Eng., Jadavpur Univ., Kolkata
  • fYear
    2009
  • fDate
    6-7 March 2009
  • Firstpage
    20
  • Lastpage
    25
  • Abstract
    A major use of microarray data is to classify genes with similar expression profiles into groups in order to investigate their biological significance. Cluster analysis is by far the most used technique for gene expression analysis. It has grown to be an important research topic in a wide variety of fields owing to its wide applications. A number of clustering methods exist with one or more limitations, such as, dependence on initial parameters, inefficiency in presence of noisy data, to name a few. This paper proposes a novel clustering algorithm for gene microarray data which is free from the above limitations. Besides, it is simple to implement, and is has been proved to be very effective even in the presence of noisy data. Further, it is extremely exhaustive and is hence, less likely to get stuck at local optima.
  • Keywords
    biology computing; pattern classification; pattern clustering; cluster analysis; gene expression analysis; gene microarray data clustering; intracluster distance; local optima; Bioinformatics; Clustering algorithms; Clustering methods; DNA; Data engineering; Educational institutions; Fungi; Gene expression; Genomics; Telecommunication computing;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Advance Computing Conference, 2009. IACC 2009. IEEE International
  • Conference_Location
    Patiala
  • Print_ISBN
    978-1-4244-2927-1
  • Electronic_ISBN
    978-1-4244-2928-8
  • Type

    conf

  • DOI
    10.1109/IADCC.2009.4808973
  • Filename
    4808973