Title :
Neuroelectromagnetic Forward Modeling Toolbox
Author :
Akalin Acar, Zeynep ; Makeig, Scott
Author_Institution :
Swartz Center for Computational Neuroscience, Institute for Neural Computation, University of California San Diego, La Jolla, USA
Abstract :
This paper introduces a Neuroelectromagnetic Forward Modeling Toolbox running under MATLAB (The Mathworks, Inc.) for generating realistic head models from available data (MRI and/or electrode locations) and for solving the forward problem of electro-magnetic source imaging numerically. The toolbox includes tools for segmenting scalp, skull, cerebrospinal fluid (CSF) and brain tissues from T1-weighted magnetic resonance (MR) images. After extracting the segmented tissue volumes, mesh generation can be performed using deformable models. When MR images are not available, it is possible to warp a template head model to measured electrode locations to obtain a better-fitting realistic model. The Boundary Element Method (BEM) is used for the numerical solution of the forward problem. Toolbox functions can be called from either a graphic user interface or from the command line. Function help messages and a tutorial are included. The toolbox is freely available under the GNU Public License for noncommercial use and open source development.
Keywords :
Electrodes; Image segmentation; MATLAB; Magnetic heads; Magnetic liquids; Magnetic resonance; Magnetic resonance imaging; Mathematical model; Scalp; Skull; Action Potentials; Algorithms; Animals; Brain; Cerebrospinal Fluid; Computational Biology; Electrodes; Humans; Magnetic Resonance Imaging; Neural Networks (Computer); Neurons; Numerical Analysis, Computer-Assisted; Radiation; Signal Processing, Computer-Assisted; Software;
Conference_Titel :
Engineering in Medicine and Biology Society, 2008. EMBS 2008. 30th Annual International Conference of the IEEE
Conference_Location :
Vancouver, BC
Print_ISBN :
978-1-4244-1814-5
Electronic_ISBN :
1557-170X
DOI :
10.1109/IEMBS.2008.4650084