Title :
Multi-class Relationship Extraction from Biomedical Literature Using Maximum Entropy
Author :
Yao, Lin ; Sun, Chengjie ; Wang, Xiaolong ; Wang, Xuan
Author_Institution :
Dept. of Comput. Sci., Harbin Inst. of Technol., Shenzhen, China
Abstract :
Relation extraction is a challenging task in biomedical text mining due to the complex of sentences in the biomedical literature. In this paper, we address multi-class relationship extraction problem from biomedical literature using Maximum Entropy model with simple word features. The proposed method is applied to extract the protein-protein interactions. Experiments show the method achieves an accuracy of 73.4% in the corpora built based on the HIV-1 Human Protein Interaction Database, which is a promising result compare to previous works.
Keywords :
biology computing; data mining; database management systems; maximum entropy methods; proteins; text analysis; HIV-1 human protein interaction database; biomedical literature; biomedical text mining; maximum entropy; multiclass relationship extraction; protein-protein interactions; Bioinformatics; Data mining; Databases; Entropy; Feature extraction; Protein engineering; Proteins; Machine Learning; Maximum Entropy Model; Protein-protein Interaction; Relationship Extraction;
Conference_Titel :
Intelligent Information Hiding and Multimedia Signal Processing (IIH-MSP), 2010 Sixth International Conference on
Conference_Location :
Darmstadt
Print_ISBN :
978-1-4244-8378-5
Electronic_ISBN :
978-0-7695-4222-5
DOI :
10.1109/IIHMSP.2010.140