Title :
Distributing Genome Sequence Databases with a Publish/Subscribe Middleware
Author :
Wang, Chen ; Zhou, Bing Bing ; Brites, Fabian ; Liu, Bin ; Zomaya, Albert Y.
Author_Institution :
Univ. of Sydney, Sydney
Abstract :
The paper presents a publish/subscribe middleware that intends to address the scalability issue of application servers hosting genome sequence similarity detection services. We give an effective annotation mechanism for distributed data and a scheduling algorithm to balance the data replication and query processing performance.
Keywords :
distributed databases; genetics; medical information systems; message passing; middleware; query processing; scheduling; sequences; annotation mechanism; application server scalability issue; data replication; genome sequence database distribution; genome sequence similarity detection services; heterogeneous data management; publish-subscribe middleware; query processing; scheduling algorithm; Bioinformatics; Biology computing; Databases; Distributed computing; Genomics; Middleware; Processor scheduling; Scalability; Scheduling algorithm; Storage area networks;
Conference_Titel :
Self-Adaptive and Self-Organizing Systems, 2007. SASO '07. First International Conference on
Conference_Location :
Cambridge, MA
Print_ISBN :
0-7695-2906-2
DOI :
10.1109/SASO.2007.19
