DocumentCode
3103004
Title
A novel predicting algorithm of thermostable proteins based on Choquet integral with respect to L-measure and Hurst exponent
Author
Shieh, Jiunn-i ; Liu, Yu-Lung ; Lee, Kuei-jen ; Chang, Pei-chun ; Liu, Yi-cheng
Author_Institution
Dept. of Inf. Sci. & Applic., Asia Univ., Wufeng, Taiwan
Volume
6
fYear
2009
fDate
12-15 July 2009
Firstpage
3167
Lastpage
3171
Abstract
Establishing a good algorithm for predicting temperature of thermostable proteins is an important issue. In this study, a novel thermostable proteins prediction method using Hurst exponent and Choquet integral regression model based on L-measure and lambda-support is proposed. The main idea of this method is to integrate the physicochemical properties, fractal property and Choquet integral regression model for amino symbolic sequences with different lengths. For evaluating the performance of this new algorithm, a 5-fold Cross-Validation MSE is performed. Experimental result shows that this new prediction scheme is better than the Choquet integral regression model based on lambda-measure and P-measure, respectively and two methods based on Hurst exponent and the traditional prediction models, ridge regression and multiple regression model, respectively.
Keywords
biology; fractals; proteins; regression analysis; sequences; Choquet integral regression model; Hurst exponent; L-measure; amino symbolic sequence; fractal property; lambda-support; physicochemical property; thermostable protein predicting algorithm; Amino acids; Asia; Chemical industry; Food industry; Machine learning; Prediction algorithms; Predictive models; Protein engineering; Solvents; Temperature; λ-measure; Hurst exponent; L-measure; P-measure; Singleton measures;
fLanguage
English
Publisher
ieee
Conference_Titel
Machine Learning and Cybernetics, 2009 International Conference on
Conference_Location
Baoding
Print_ISBN
978-1-4244-3702-3
Electronic_ISBN
978-1-4244-3703-0
Type
conf
DOI
10.1109/ICMLC.2009.5212804
Filename
5212804
Link To Document