• DocumentCode
    3106784
  • Title

    Probabilistic Segmentation and Analysis of Horizontal Cells

  • Author

    Ljosa, Vebjorn ; Singh, Ambuj K.

  • Author_Institution
    Univ. of California, Santa Barbara, CA
  • fYear
    2006
  • fDate
    18-22 Dec. 2006
  • Firstpage
    980
  • Lastpage
    985
  • Abstract
    Because images of neurons show interweaved processes from multiple cells, it is hard to determine which pixels belong to each cell, and consequently to analyze the images automatically. To manage these difficulties, we introduce probabilistic segmentation, in which each pixel is assigned a probability of belonging to each cell instead of being categorically assigned to one cell. We propose a randomized algorithm for probabilistic segmentation. The algorithm is based on repeated, intensity-weighted random walks on the image, and leads to improved segmentation quality. Analysis and mining techniques can utilize the more nuanced and complete information that the probabilistic segmentation yields about an image. Such techniques can then compute probabilistic values, which indicate the level of confidence that can be placed in them.
  • Keywords
    biology computing; cellular biophysics; image segmentation; probability; randomised algorithms; horizontal cells; intensity-weighted random walks; interweaved process; multiple cells; probabilistic segmentation; randomized algorithm; segmentation quality; Cells (biology); Fluorescence; Image analysis; Image segmentation; Injuries; Morphology; Neurons; Photoreceptors; Proteins; Retina;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Data Mining, 2006. ICDM '06. Sixth International Conference on
  • Conference_Location
    Hong Kong
  • ISSN
    1550-4786
  • Print_ISBN
    0-7695-2701-7
  • Type

    conf

  • DOI
    10.1109/ICDM.2006.129
  • Filename
    4053139