DocumentCode
3134688
Title
An Interactive Visualization-Based Approach for High Throughput Screening Information Management in Drug Discovery
Author
Chan, Tammy Pui Shan ; Malik, Preeti ; Singh, Rahul
Author_Institution
Dept. of Comput. Sci., San Francisco State Univ., CA
fYear
2006
fDate
Aug. 30 2006-Sept. 3 2006
Firstpage
5794
Lastpage
5797
Abstract
While high throughput screening (HTS) techniques are capable of generating large amounts of biologically significant data, assimilating and mining this information can be extremely complex and potentially crucial information patterns can easily be lost in the mounds of data. The predominantly life-science oriented scientific training of the researchers in this area furthermore, precludes their using complex querying or data-mining algorithms. Keeping in account these challenges, our goal in this paper is to provide a highly intuitive environment for storing and interacting with large amounts of HTS assay data. The principal modes of user-data interactions supported in the proposed paradigm are interaction and visualization rich. Moreover, they span the heterogeneous data modalities common to drug discovery, including but not limited to chemical structures, high-throughput assay formats, graphical information, and alpha-numeric data types. Case studies and experiments demonstrate the efficacy of the proposed approach in terms of its ease of use as well as its capability to discern complex information patterns in the data
Keywords
data assimilation; data mining; data visualisation; drugs; medical information systems; user interfaces; alpha-numeric data types; chemical structures; data storage; drug discovery; graphical information; heterogeneous data modality; high throughput screening information management; high-throughput assay formats; information assimilation; information mining; interactive visualization-based approach; intuitive environment; user-data interactions; Chemicals; Data visualization; Drugs; High temperature superconductors; Information management; Lead compounds; Pharmaceuticals; Throughput; User interfaces; Visual databases;
fLanguage
English
Publisher
ieee
Conference_Titel
Engineering in Medicine and Biology Society, 2006. EMBS '06. 28th Annual International Conference of the IEEE
Conference_Location
New York, NY
ISSN
1557-170X
Print_ISBN
1-4244-0032-5
Electronic_ISBN
1557-170X
Type
conf
DOI
10.1109/IEMBS.2006.259448
Filename
4463124
Link To Document