• DocumentCode
    3134688
  • Title

    An Interactive Visualization-Based Approach for High Throughput Screening Information Management in Drug Discovery

  • Author

    Chan, Tammy Pui Shan ; Malik, Preeti ; Singh, Rahul

  • Author_Institution
    Dept. of Comput. Sci., San Francisco State Univ., CA
  • fYear
    2006
  • fDate
    Aug. 30 2006-Sept. 3 2006
  • Firstpage
    5794
  • Lastpage
    5797
  • Abstract
    While high throughput screening (HTS) techniques are capable of generating large amounts of biologically significant data, assimilating and mining this information can be extremely complex and potentially crucial information patterns can easily be lost in the mounds of data. The predominantly life-science oriented scientific training of the researchers in this area furthermore, precludes their using complex querying or data-mining algorithms. Keeping in account these challenges, our goal in this paper is to provide a highly intuitive environment for storing and interacting with large amounts of HTS assay data. The principal modes of user-data interactions supported in the proposed paradigm are interaction and visualization rich. Moreover, they span the heterogeneous data modalities common to drug discovery, including but not limited to chemical structures, high-throughput assay formats, graphical information, and alpha-numeric data types. Case studies and experiments demonstrate the efficacy of the proposed approach in terms of its ease of use as well as its capability to discern complex information patterns in the data
  • Keywords
    data assimilation; data mining; data visualisation; drugs; medical information systems; user interfaces; alpha-numeric data types; chemical structures; data storage; drug discovery; graphical information; heterogeneous data modality; high throughput screening information management; high-throughput assay formats; information assimilation; information mining; interactive visualization-based approach; intuitive environment; user-data interactions; Chemicals; Data visualization; Drugs; High temperature superconductors; Information management; Lead compounds; Pharmaceuticals; Throughput; User interfaces; Visual databases;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Engineering in Medicine and Biology Society, 2006. EMBS '06. 28th Annual International Conference of the IEEE
  • Conference_Location
    New York, NY
  • ISSN
    1557-170X
  • Print_ISBN
    1-4244-0032-5
  • Electronic_ISBN
    1557-170X
  • Type

    conf

  • DOI
    10.1109/IEMBS.2006.259448
  • Filename
    4463124