• DocumentCode
    3149938
  • Title

    Identification of Salient Patterns for Classification of Gene Expression Data

  • Author

    Pok, Gouchol ; Quan, Guangri ; Ryu, Keun Ho

  • Author_Institution
    Dept. of Comput. Sci., Yanbian Univ. of Sci. & Technol., Yanji, China
  • fYear
    2010
  • fDate
    18-20 June 2010
  • Firstpage
    1
  • Lastpage
    4
  • Abstract
    Identification of salient patterns for the classification of gene expression profiles is a useful step in examining the biological significance and correlation of genes with disease states. We propose a clustering-based approach in which feature selection is first carried out to identify influential genes and then salient patterns are determined to characterize each of the different classes. The proposed method has been tested with the complicated colon tumor data and the experimental results are evaluated in comparison with the published ones.
  • Keywords
    bioinformatics; diseases; feature extraction; genetics; molecular biophysics; pattern classification; pattern clustering; tumours; clustering-based approach; colon tumor data; disease states; feature selection; gene correlation; gene expression data; pattern classification; salient patterns; Bioinformatics; Biology; Clustering algorithms; Clustering methods; Colon; Computer science; Diseases; Gene expression; Neoplasms; Testing;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Bioinformatics and Biomedical Engineering (iCBBE), 2010 4th International Conference on
  • Conference_Location
    Chengdu
  • ISSN
    2151-7614
  • Print_ISBN
    978-1-4244-4712-1
  • Electronic_ISBN
    2151-7614
  • Type

    conf

  • DOI
    10.1109/ICBBE.2010.5517931
  • Filename
    5517931