• DocumentCode
    3173310
  • Title

    Hydration Shells in Voronoi Tessellations

  • Author

    Voloshin, V.P. ; Anikeenko, A.V. ; Medvedev, N.N. ; Geiger, Andreas ; Stoyan, D.

  • Author_Institution
    Inst. of Chem. Kinetics & Combustion, SB RAS, Novosibirsk, Russia
  • fYear
    2010
  • fDate
    28-30 June 2010
  • Firstpage
    254
  • Lastpage
    259
  • Abstract
    An interesting property of the Voronoi tessellation is studied in the context of its application to the analysis of hydration shells in computer simulation of solutions. Namely the shells around a randomly chosen cell in a Voronoi tessellation attract extra volume from outside. There is a theoretical result which says that the mean volume of the first shell around a randomly chosen cell is greater than the anticipated value. The paper investigates this phenomenon for Voronoi tessellations constructed for computer models of point patterns with different variability of the Voronoi cell volumes (Poisson point process, RSA systems of hard spheres and molecular dynamics models of water). It analyzes also the subsequent shells, and proposes formulas for the mean shell volumes for all shell numbers. The obtained results are of value in calculations of the contribution of hydration of water to the “apparent” volume of the solutes.
  • Keywords
    chemistry computing; computational geometry; digital simulation; solid modelling; statistical analysis; stochastic processes; Poisson point process; RSA systems; Voronoi cell volumes; Voronoi tessellations; hydration shells; mean shell volumes; point pattern model; solution simulation; water molecular dynamics models; Application software; Chemical engineering; Combustion; Computer simulation; Kinetic theory; Particle measurements; Proteins; Stochastic processes; Volume measurement; Water; Voronoi tessellation; shell volume; solvation shell; topological neighbors;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Voronoi Diagrams in Science and Engineering (ISVD), 2010 International Symposium on
  • Conference_Location
    Quebec, QC
  • Print_ISBN
    978-1-4244-7606-0
  • Electronic_ISBN
    978-1-4244-7605-3
  • Type

    conf

  • DOI
    10.1109/ISVD.2010.20
  • Filename
    5521431