DocumentCode :
3174062
Title :
Effect of bio-inspired multi-stage regulations for diagnostic molecular automata
Author :
Hirabayashi, Miki ; Ohashi, Hirotada ; Kubo, Tai
Author_Institution :
Dept. of Quantum Eng. & Syst. Sci., Univ. of Tokyo, Tokyo
fYear :
2008
fDate :
Sept. 28 2008-Oct. 1 2008
Firstpage :
55
Lastpage :
62
Abstract :
Bio-inspired natural computing is expected to bring new solutions to various problems confronting us. We already presented a novel concept for transcriptome diagnosis using transcription-based molecular automata. Here we introduce new multi-stage regulations to this diagnostic system in order to reduce the background noise and increase the sensitivity. We use two explicit detector probes with a stem and a memory loop at the pre-transcriptional stage, and one implicit binary aptameric sensor at the post-transcriptional stage. In addition to this we adopt the error control element to improve the detection ability. Consequently we found that the noise was reduced to one-forty-fifth and the sensitivity increased five-fold by the regulation using the combination of several strategies. Basically the living organisms control themselves by complex and dexterous manners. The incorporation of bio-inspired redundant strategies bring the all-too-simple and unstable artificial systems close to the robust and reliable ones.
Keywords :
DNA; automata theory; biocomputing; biosensors; medical diagnostic computing; molecular biophysics; aptameric sensor; bio-inspired multistage regulations; detector probes; diagnostic molecular automata; error control; memory loop; natural computing; noise; transcriptome diagnosis; Arm; Automata; Detectors; Fluorescence; Noise reduction; Probes; Quantum computing; RNA; Sequences; Systems engineering and theory;
fLanguage :
English
Publisher :
ieee
Conference_Titel :
Bio-Inspired Computing: Theories and Applications, 2008. BICTA 2008. 3rd International Conference on
Conference_Location :
Adelaide, SA
Print_ISBN :
978-1-4244-2724-6
Type :
conf
DOI :
10.1109/BICTA.2008.4656704
Filename :
4656704
Link To Document :
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