• DocumentCode
    3177425
  • Title

    Computer control of gene expression: Robust setpoint tracking of protein mean and variance using integral feedback

  • Author

    Briat, Corentin ; Khammash, Mustafa

  • Author_Institution
    Dept. of Biosyst. Sci. & Eng. (D-BSSE), ETH Zurich, Basel, Switzerland
  • fYear
    2012
  • fDate
    10-13 Dec. 2012
  • Firstpage
    3582
  • Lastpage
    3588
  • Abstract
    Protein mean and variance levels in a simple stochastic gene expression circuit are controlled using proportional integral feedback. It is shown that the protein mean level can be globally and robustly tracked to any desired value using a simple PI controller that satisfies explicit sufficient conditions. Controlling both the mean and variance requires on the other hand the use of an additional control input, chosen here as the mRNA degradation rate. Local robust tracking of mean and variance is proved to be achievable using multivariable PI control, provided that the reference point satisfies necessary conditions imposed by the system. Even more importantly, it is shown that there exist PI controllers that locally, robustly and simultaneously stabilize all the admissible equilibrium points. Simulation examples illustrate the results.
  • Keywords
    PI control; RNA; biocontrol; feedback; genetics; multivariable control systems; proteins; stochastic systems; admissible equilibrium points; gene expression computer control; mRNA degradation rate; multivariable PI control; proportional integral feedback; protein mean levels; protein variance levels; reference point; robust setpoint tracking; stochastic gene expression circuit; Asymptotic stability; Closed loop systems; Gene expression; Proteins; Robustness; Stability criteria; Gene expression network; PI control; absolute stability; moment control;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Decision and Control (CDC), 2012 IEEE 51st Annual Conference on
  • Conference_Location
    Maui, HI
  • ISSN
    0743-1546
  • Print_ISBN
    978-1-4673-2065-8
  • Electronic_ISBN
    0743-1546
  • Type

    conf

  • DOI
    10.1109/CDC.2012.6426720
  • Filename
    6426720