DocumentCode
3179205
Title
Similar subsequence retrieval from two time series data using homology search
Author
Nishii, Takuma ; Hiroyasu, Tomoyuki ; Yoshimi, Masato ; Miki, Mitsunori ; Yokouchi, Hisatake
Author_Institution
Grad. Sch. of Eng., Doshisha Univ., Kyoto, Japan
fYear
2010
fDate
10-13 Oct. 2010
Firstpage
1062
Lastpage
1067
Abstract
We propose a method for extracting the most similar subsequences from two time series data by quantizing them and performing a homology search. The homology searches, such as BLAST and SW, are string search algorithms. Therefore, time series data should be quantized. SAX and EIAD were applied as quantization methods, and their effectiveness was examined by experiment. According to the experiments, time series data sets were classified into four types of time series data set, and we discuss the characteristics of SAX and EIAD.
Keywords
bioinformatics; data handling; information retrieval; time series; EIAD; SAX; homology search; quantization methods; similar subsequence retrieval; string search algorithms; time series data; Biology; Homology Search; Requantization; Similarity Search; Smith-Waterman Algorithm; Time Series Data;
fLanguage
English
Publisher
ieee
Conference_Titel
Systems Man and Cybernetics (SMC), 2010 IEEE International Conference on
Conference_Location
Istanbul
ISSN
1062-922X
Print_ISBN
978-1-4244-6586-6
Type
conf
DOI
10.1109/ICSMC.2010.5641809
Filename
5641809
Link To Document