• DocumentCode
    3194795
  • Title

    Information decoding in microscopic biological processes

  • Author

    Kobayashi, Tetsuya J.

  • Author_Institution
    Inst. of Ind. Sci., Univ. of Tokyo, Tokyo, Japan
  • fYear
    2013
  • fDate
    3-7 July 2013
  • Firstpage
    2704
  • Lastpage
    2707
  • Abstract
    The cellular and intracellular dynamics are intrinsically stochastic and dynamic. However, whole biological system such as a cell or our body can function very robustly and stably even though they are composed of these stochastic reactions. To account for this riddling relation between macroscopic robustness and microscopic stochasticity, I propose a mechanism that information relevant for stable and reliable operation of a biological system is embedded in apparently stochastic and noisy behavior of their components. To show validity of this possibility, I demonstrates that information can actually be decoded from apparently noisy signal when it is processed by an appropriate dynamics derived by Bayes´ rule. Next, I investigate biological relevance of this possibility by showing that several intracellular networks can implement this decoding dynamics. Finally, by focusing its dynamical properties, I show the mechanism how the derived dynamics can separate information and noise.
  • Keywords
    Bayes methods; bioinformatics; cellular biophysics; decoding; stochastic processes; Bayes rule; biological system; cellular dynamics; decoding dynamics; dynamical properties; information decoding; intracellular dynamics; intracellular networks; intrinsic stochastic reactions; macroscopic robustness; microscopic biological processes; microscopic stochasticity; noisy behavior; noisy signal; riddling relation; Biological systems; Data mining; Decoding; Equations; Noise measurement; Robustness; Sensors;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Engineering in Medicine and Biology Society (EMBC), 2013 35th Annual International Conference of the IEEE
  • Conference_Location
    Osaka
  • ISSN
    1557-170X
  • Type

    conf

  • DOI
    10.1109/EMBC.2013.6610098
  • Filename
    6610098