Title :
Exploring genomes with a game engine
Author :
Shepherd, Jeremiah J. ; Lingxi Zhou ; Yan Zhang ; Jim Zheng ; Jijun Tang
Author_Institution :
Sch. of Comput. Sci. & Eng., Univ. of South Carolina, Columbia, SC, USA
Abstract :
Studying genomes continues to be beneficial for evolutionary discover, and prognosticating/diagnosing many genetic disorders and diseases. Most of the these studies have used systems that view the DNA in a linear structure, but having this information is only a small part of fully understanding what they can reveal. Visualizing genomes in real time 3D can give researchers more insight, but this is fraught with hardware limitations. Each element contains vast amounts of information that cannot be processed at once. However, by using a game engine and sophisticated video game visualization techniques, we were able to construct a multi-platform real-time 3D genome viewer.
Keywords :
DNA; bioinformatics; computer games; data visualisation; diseases; genomics; medical computing; medical disorders; molecular biophysics; molecular configurations; disease diagnosis; disease prognosis; evolutionary discovery; game engine; genetic disorder diagnosis; genetic disorder prognosis; genome exploration; hardware limitations; linear DNA structure; multiplatform real-time 3D genome viewer; real time 3D genome visualization; video game visualization techniques; Biological cells; Data visualization; Engines; Games; Genomics; Octrees; Three-dimensional displays;
Conference_Titel :
Bioinformatics and Biomedicine (BIBM), 2013 IEEE International Conference on
Conference_Location :
Shanghai
DOI :
10.1109/BIBM.2013.6732585