• DocumentCode
    3198227
  • Title

    Study on NcRNAs related to Cancer using Z-curve method

  • Author

    Yang, Yan-ling

  • Author_Institution
    Shandong Provincial Key Lab. of Functional Macromol. Biophys., De Zhou, China
  • Volume
    2
  • fYear
    2012
  • fDate
    3-5 Aug. 2012
  • Firstpage
    837
  • Lastpage
    840
  • Abstract
    It is accepted that non-coding RNAs (ncRNAs) play very important roles in the cellular process of translation and relates to Human Severe Diseases. In this work, 14 disease-related ncRNA sequences are selected from the NONCODE database. These different ncRNAs play regulator or constituent roles and relate to Cancer. In this work, we map and analyze the Z curves of the selected sequences using Z-curve method. Then we compare the curves and calculate the base content, respectively. We can see that there are almost same curves and base content for one kind of ncRNAs playing same roles. Meanwhile, there are obviously differences in some curves of ncRNA sequences having different functions and coming from different organisms. The conclusion is that the feature of Z-curves is a criterion to recognize ncRNAs and the Z-curve is connected with the function and organisms.
  • Keywords
    RNA; cancer; cellular biophysics; molecular biophysics; NONCODE database; NcRNA; Z-curve method; cancer; cellular process; human severe diseases; noncoding RNA; sequences; translation; Bioinformatics; Genomics; Cancer; Z-curve; mutation; non-coding RNA; role; sequence;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Information Technology in Medicine and Education (ITME), 2012 International Symposium on
  • Conference_Location
    Hokodate, Hokkaido
  • Print_ISBN
    978-1-4673-2109-9
  • Type

    conf

  • DOI
    10.1109/ITiME.2012.6291433
  • Filename
    6291433