Title :
Ontology for Heart Rate Turbulence Domain From The Conceptual Model of SNOMED-CT
Author :
Soguero-Ruiz, Cristina ; Lechuga-Suarez, Luis ; Mora-Jimenez, Inmaculada ; Ramos-Lopez, J. ; Barquero-Perez, O. ; Garcia-Alberola, A. ; Rojo-Alvarez, Jose
Author_Institution :
Dept. of Signal Theor. & Commun., Univ. Rey Juan Carlos, Fuenlabrada, Spain
Abstract :
Electronic health record (EHR) automates the clinician workflow, allowing evidence-based decision support and quality management. We aimed to start a framework for domain standardization of cardiovascular risk stratification into the EHR, including risk indices whose calculation involves ECG signal processing. We propose the use of biomedical ontologies completely based on the conceptual model of SNOMED-CT, which allows us to implement our domain in the EHR. In this setting, the present study focused on the heart rate turbulence (HRT) domain, according to its concise guidelines and clear procedures for parameter calculations. We used 289 concepts from SNOMED-CT, and generated 19 local extensions (new concepts) for the HRT specific concepts not present in the current version of SNOMED-CT. New concepts included averaged and individual ventricular premature complex tachograms, initial sinus acceleration for turbulence onset, or sinusal oscillation for turbulence slope. Two representative use studies were implemented: first, a prototype was inserted in the hospital information system for supporting HRT recordings and their simple follow up by medical societies; second, an advanced support for a prospective scientific research, involving standard and emergent signal processing algorithms in the HRT indices, was generated and then tested in an example database of 27 Holter patients. Concepts of the proposed HRT ontology are publicly available through a terminology server, hence their use in any information system will be straightforward due to the interoperability provided by SNOMED-CT.
Keywords :
cardiovascular system; decision support systems; electrocardiography; medical information systems; medical signal processing; ontologies (artificial intelligence); oscillations; standardisation; turbulence; ECG signal processing; Holter patients; SNOMED-CT; biomedical ontologies; cardiovascular risk stratification; clinician workflow; conceptual model; domain standardization; electronic health record; evidence-based decision support; heart rate turbulence domain; hospital information system; individual ventricular premature complex tachograms; initial sinus acceleration; prospective scientific research; quality management; signal processing algorithms; sinusal oscillation; systematized nomenclature-of-medicine clinical terms; turbulence onset; turbulence slope; Electrocardiography; Heart rate; Hospitals; Ontologies; Prototypes; Signal processing; Terminology; Cardiovascular risk; SNOMED-CT; conceptual model; electrocardiogram (ECG); electronic health recording(EHR); heart rate turbulence (HRT); ontology; Arrhythmias, Cardiac; Electrocardiography; Electronic Health Records; Heart Rate; Natural Language Processing; Spain; Systematized Nomenclature of Medicine; Terminology as Topic;
Journal_Title :
Biomedical Engineering, IEEE Transactions on
DOI :
10.1109/TBME.2013.2243147