• DocumentCode
    3231694
  • Title

    Molecular docking study of a tocotrienol and P-glycoprotein

  • Author

    Shaharom, R.R.S. ; Nayan, M.N. ; Radzi, M.M.N. ; Akbar, Rois ; Jusoh, S.A.

  • Author_Institution
    Bioinf. Lab., Univ. Teknol. MARA (UiTM), Bandar Puncak Alam, Malaysia
  • fYear
    2013
  • fDate
    7-9 April 2013
  • Firstpage
    147
  • Lastpage
    151
  • Abstract
    Multidrug resistance is a major challenge in cancer chemotherapy and is often linked to the overexpression of P-glycoprotein (P-gp). P-gp acts as an energy-requiring efflux pump for various types of natural products and compounds including chemotherapeutic drugs. In this study, tocotrienol, a member of the vitamin E family is studied to explore its potential interaction with the human P-gp. The interaction binding sites of P-gp were predicted and analyzed using Fpocket web server. Two molecular docking programs; FireDock and AutoDock Vina were used to study the interaction between tocotrienol and P-gp. The results suggest that tocotrienol binds to amino acid residues TYR 307 and LYS 934 of P-gp. Both FireDock and AutoDock Vina show consistency in terms of conformations. This study shows potential interactions of tocotrienols with P-gp.
  • Keywords
    Internet; biochemistry; cancer; drugs; file servers; medical computing; molecular biophysics; patient treatment; proteins; AutoDock Vina; FireDock; Fpocket web server; LYS 934 amino acid residue; P-glycoprotein; P-gp interaction binding site; TYR 307 amino acid residue; cancer chemotherapy; chemotherapeutic drug; energy-requiring efflux pump; human P-gp; molecular conformation; molecular docking program; multidrug resistance; natural product; tocotrienol-P-gp interaction; vitamin E family; Cancer; Compounds; Drugs; Hydrogen; Immune system; Proteins; Web servers; AutoDock Vina; FireDock; Fpocket; Molecular Docking; P-glycoprotein; Tocotrienol;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Computers & Informatics (ISCI), 2013 IEEE Symposium on
  • Conference_Location
    Langkawi
  • Print_ISBN
    978-1-4799-0209-5
  • Type

    conf

  • DOI
    10.1109/ISCI.2013.6612393
  • Filename
    6612393