DocumentCode
3243994
Title
Robust Intervention in Probabilistic Boolean Networks
Author
Pal, Ravindra ; Datta, Amitava ; Dougherty, Edward R.
Author_Institution
Texas Tech Univ., Lubbock
fYear
2007
fDate
4-7 Nov. 2007
Firstpage
29
Lastpage
33
Abstract
One of the objectives of genetic regulatory network modeling is to design intervention approaches for affecting the time evolution of the gene activity profile of the network. The intervention strategies proposed in the context of Probabilistic Boolean Networks(PBNs) assume perfect knowledge of the transition probability matrix of the PBN. This assumption cannot be satisfied in practice due to estimation errors or mismatch between the PBN model and the actual genetic regulatory network. In this paper, we develop a robust intervention strategy that is obtained by minimizing the worst-case cost over the uncertainties in the entries of the transition probability matrix.
Keywords
Boolean functions; genetics; matrix algebra; minimisation; probability; uncertainty handling; gene activity profile; genetic regulatory network modeling; probabilistic Boolean networks; robust design intervention approach; time evolution; transition probability matrix; uncertainty handling; worst-case cost minimization; Bioinformatics; Biological system modeling; Data mining; Estimation error; Evolution (biology); Genetics; Genomics; Robustness; Steady-state; Uncertainty;
fLanguage
English
Publisher
ieee
Conference_Titel
Signals, Systems and Computers, 2007. ACSSC 2007. Conference Record of the Forty-First Asilomar Conference on
Conference_Location
Pacific Grove, CA
ISSN
1058-6393
Print_ISBN
978-1-4244-2109-1
Electronic_ISBN
1058-6393
Type
conf
DOI
10.1109/ACSSC.2007.4487158
Filename
4487158
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