• DocumentCode
    3243994
  • Title

    Robust Intervention in Probabilistic Boolean Networks

  • Author

    Pal, Ravindra ; Datta, Amitava ; Dougherty, Edward R.

  • Author_Institution
    Texas Tech Univ., Lubbock
  • fYear
    2007
  • fDate
    4-7 Nov. 2007
  • Firstpage
    29
  • Lastpage
    33
  • Abstract
    One of the objectives of genetic regulatory network modeling is to design intervention approaches for affecting the time evolution of the gene activity profile of the network. The intervention strategies proposed in the context of Probabilistic Boolean Networks(PBNs) assume perfect knowledge of the transition probability matrix of the PBN. This assumption cannot be satisfied in practice due to estimation errors or mismatch between the PBN model and the actual genetic regulatory network. In this paper, we develop a robust intervention strategy that is obtained by minimizing the worst-case cost over the uncertainties in the entries of the transition probability matrix.
  • Keywords
    Boolean functions; genetics; matrix algebra; minimisation; probability; uncertainty handling; gene activity profile; genetic regulatory network modeling; probabilistic Boolean networks; robust design intervention approach; time evolution; transition probability matrix; uncertainty handling; worst-case cost minimization; Bioinformatics; Biological system modeling; Data mining; Estimation error; Evolution (biology); Genetics; Genomics; Robustness; Steady-state; Uncertainty;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Signals, Systems and Computers, 2007. ACSSC 2007. Conference Record of the Forty-First Asilomar Conference on
  • Conference_Location
    Pacific Grove, CA
  • ISSN
    1058-6393
  • Print_ISBN
    978-1-4244-2109-1
  • Electronic_ISBN
    1058-6393
  • Type

    conf

  • DOI
    10.1109/ACSSC.2007.4487158
  • Filename
    4487158