Energy diffusion model of bR for voxel identification

In this paper, a potential biological structure for computer volumetric memory is investigated. Bacteriorhodopsin is a protein found in the purple membrane of the bacteria Halobacterium salinarum. This protein has light absorption properties that generate different stable states allowing the use of multilevel logic as well as binary logic. CHARMmtrade has been used to simulate the energy response of Bacteriorhodopsin at room temperature 300K for the bR ground state and the other states. The K state takes place after blue light (lambda= 635nm) absorption on the bR state. The energy difference is found to be an increase of 1086.92 kcal/mol which is responsible for triggering the photocycle that also includes the states K, L, M, N, and O. An energy surplus is found between O and bR state that may be spread to surrounding molecules. However, conformational interference does not produce photons necessary for the isomerization reaction. Further quantum molecular (QM) analysis should provide an extended model for this macromolecular energy study