Title :
A signaling pathway and model for cell death/survival using VHDL
Author :
Jain, Shruti ; Rastogi, Shivam ; Chaudhry, Anshika ; Tiwari, Shweta
Author_Institution :
Dept. of Electron. & Commun. Eng., Jaypee Univ. of Inf. Technol., Solan, India
Abstract :
A well-structured and controlled design methodology, along with a supporting hierarchical design system, has been developed to optimally support the development effort on several programs requiring gate array and semi custom Very Large Scale Integration (VLSI) design. In this paper, we will present an application of VLSI in System Biology. This work examines signaling networks that control the survival decision treated with combinations of three primary signals the pro death cytokine, tumor necrosis factor-?? (TNF), and the pro survival growth factors, epidermal growth factor (EGF) and insulin. The model for cell survival/ death has been implemented using ORCAD, Very High Speed Integrated Circuit Hardware Description Language (VHDL) (Xilinx Tool) taking TNF, EGF and Insulin as input signal.
Keywords :
VLSI; biology computing; cellular biophysics; hardware description languages; integrated circuit design; logic arrays; logic design; tumours; ORCAD; VHDL; VLSI design; Very High Speed Integrated Circuit Hardware Description Language; Xilinx Tool; cell death model; cell survival model; epidermal growth factor; gate array; hierarchical design system; insulin; pro death cytokine; pro survival growth factor; signaling pathway; survival decision; system biology; tumor necrosis factor-??; very large scale integration; Biological system modeling; Control systems; Design methodology; Epidermis; Insulin; Integrated circuit modeling; Neoplasms; Optimal control; Systems biology; Very large scale integration; Epidermal Growth Factor; Insulin; Tumor Necrosis Factor-α; VLSI;
Conference_Titel :
Methods and Models in Computer Science, 2009. ICM2CS 2009. Proceeding of International Conference on
Conference_Location :
Delhi
Print_ISBN :
978-1-4244-5051-0
DOI :
10.1109/ICM2CS.2009.5397978