Title :
Multi-Label Learning for Prediction of Subcellular Localization of Human Proteins
Author :
Wu Zhicheng ; Xiao Xuan
Author_Institution :
Inf. Eng. Sch., Jingdezhen Ceramic Inst., Jingdezhen, China
Abstract :
The prediction of human protein subcellular localization has attracted extensive efforts because it is closely related to development of drugs and basic biology. Especially when the proteins may simultaneously exist in two or more different subcellular locations, the problem becomes more challenging and interesting. The approach proposed in this work integrated the GO (gene ontology) and evolution information of protein to predict the subcellular locations of human proteins with single or multiple sites, covering 14 subcellular locations. Because of novel application patterns of both GO and PSSM, the result is much better than the art of state.
Keywords :
biology computing; genetics; learning (artificial intelligence); ontologies (artificial intelligence); proteins; drug development; gene ontology; human protein subcellular localization prediction; multilabel learning; Amino acids; Bioinformatics; Feature extraction; Humans; Ontologies; Proteins;
Conference_Titel :
Bioinformatics and Biomedical Engineering, (iCBBE) 2011 5th International Conference on
Conference_Location :
Wuhan
Print_ISBN :
978-1-4244-5088-6
DOI :
10.1109/icbbe.2011.5780012