• DocumentCode
    3317940
  • Title

    Notice of Retraction
    Cloning, Characterization and Expression Analysis of DEAD-Box Family Vasa Gene, in Largescale Shoveljaw Fish(Onychostoma macrolepis)

  • Author

    Xiaofei Yang ; Shaogang Xu ; Yuezhi Wang ; Guiqiang Yang

  • Author_Institution
    Nat. Eng. Res. Center for Freshwater Fisheries, Beijing Fisheries Res. Inst., Beijing, China
  • fYear
    2011
  • fDate
    10-12 May 2011
  • Firstpage
    1
  • Lastpage
    5
  • Abstract
    Notice of Retraction

    After careful and considered review of the content of this paper by a duly constituted expert committee, this paper has been found to be in violation of IEEE´s Publication Principles.

    We hereby retract the content of this paper. Reasonable effort should be made to remove all past references to this paper.

    The presenting author of this paper has the option to appeal this decision by contacting TPII@ieee.org.

    The RNA helicase vasa is a member of the DEAD box protein family that plays an indispensable role in germcell and differentiation of reproductive system. In this study, vasa encoding genes was isolated from gonads of largescale shoveljaw fish (Onychostoma macrolepis) using homologous cloning and the RACE method. The complete cDNA of vasa gene (Gene Bank: HQ412513) contains a 760bp 5´ Untranslated Regions (UTR), 1848 bp open reading frame (ORF), encoding 616 amino acids are predicted and 116 bp 3´ Untranslated Regions (UTR). A condensed phylogenetic tree was constructed based on the amino acid sequences of the vasa and well-defined vertebrate vasa. The overall topology of the tree showed that the vasa in Onychostoma macrolepis clusters vasa had similarities with vasas of other species. The result enriches our understanding on the high level conservation of the amino acid sequence in the largescale shoveljaw fish. The largescale shoveljaw fish vasa shared 93% sequenced identity with Carassius auratus. The quantitative real-time PCR (qRT-PCR) analysis demonstrated that the vasa encoding gene was detected in intestine, heart, testis, liver, muscle, spleen, brain, cheek, ovary, and mainly detected in testis. During the different concentration of Estradiol, the tesitis vasa mRNA was weakly expressed from the dosage of 8 to 22μg/g body mass (p<;0.05), in the ovary, it was highly expressed at the dosage of 8μg/g body mass (p<;0.05). On the other hand, it was highly expressed in ovary after the m- scle injections of Methyltesto sterone, at the dosage of 20μg/g body mass (p<;0.01).
  • Keywords
    DNA; bioinformatics; brain; cardiology; enzymes; evolution (biological); genetics; liver; molecular biophysics; molecular configurations; muscle; Carassius auratus; DEAD box family vasa gene; DEAD box protein family; Estradiol; Methyltesto sterone; Onychostoma macrolepis; Onychostoma macrolepis clusters vasa; RACE method; RNA helicase vasa; amino acid sequences; amino acids; brain; cDNA; cheek; expression analysis; germcell; gonads; heart; homologous cloning; intestine; liver; muscle; open reading frame; ovary; phylogenetic tree; quantitative real-time PCR analysis; reproductive system differentiation; shoveljaw fish; spleen; tesitis vasa mRNA; testis; untranslated regions; vasa encoding genes; Amino acids; Cloning; Marine animals; Muscles; Proteins; RNA; Real time systems;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Bioinformatics and Biomedical Engineering, (iCBBE) 2011 5th International Conference on
  • Conference_Location
    Wuhan
  • ISSN
    2151-7614
  • Print_ISBN
    978-1-4244-5088-6
  • Type

    conf

  • DOI
    10.1109/icbbe.2011.5780032
  • Filename
    5780032