Title :
Automatic Particle Picking from Cryo-Electron Microscopy Images by Using Partial Least Squares
Author_Institution :
Sch. of CISCO Inf., Guangdong Univ. of Foreign Study, Guangzhou, China
Abstract :
Single-particle analysis is a three-dimensional (3D) structure determining technique using electron microscopy. In this technique, a large number of projections is required to create 3D reconstruction. Manual selection of particles, by visual observation of the micrographs on a computer screen, is recognized as a bottleneck in automated single-particle reconstruction. In this paper, we established a brand-new method which is based on partial least squares theory. After initial selection for candidate particles, a PLS recognition model is set up to identify the needed particles from the candidates.
Keywords :
biological techniques; biology computing; biothermics; feature extraction; image reconstruction; least squares approximations; molecular biophysics; transmission electron microscopy; 3D reconstruction; automatic particle picking; computer screen; cryoelectron microscopy images; micrographs; partial least squares; particle selection; projections; single-particle analysis; three-dimensional structure; Biology; Feature extraction; Image reconstruction; Microscopy; Principal component analysis; Three dimensional displays; Training;
Conference_Titel :
Bioinformatics and Biomedical Engineering, (iCBBE) 2011 5th International Conference on
Conference_Location :
Wuhan
Print_ISBN :
978-1-4244-5088-6
DOI :
10.1109/icbbe.2011.5780224