DocumentCode
3321589
Title
A novel laboratory version management system for tracking complex biological experiments
Author
Shui, William M. ; Lam, Nicole ; Wong, Raymond K.
Author_Institution
Sch. of Comput. Sci. & Eng., New South Wales Univ., Sydney, NSW, Australia
fYear
2003
fDate
10-12 March 2003
Firstpage
133
Lastpage
140
Abstract
Ability to keep track of records for various biological experiments allows for future validation of the current experiments and other non-experimental laboratory procedures. With the increasing popularity of publishing biological data in XML format, there arises the need for the control and management of this data, as well as dynamically exporting this data to various formats for reporting purposes. As such data is constantly changing, users want to be able to query previous versions, plotting data across different versions from history, query changes in documents, as well as to retrieve a particular document version efficiently. This paper proposes an XML-based version management system for tracking and analyzing data obtained from any laboratory experiments in an effective and meaningful manner. This includes experiments ranging from genomic, proteomic and protein structural. We also present methods for importing non XML data into the system as well as generating reports in multiple formats dynamically.
Keywords
biological techniques; biology computing; genetics; hypermedia markup languages; laboratory techniques; proteins; XML format; XML-based version management system; complex biological experiments tracking; documents changes query; genomic; laboratory version management system; protein structural experiments; proteomic; Bioinformatics; Biological control systems; Data analysis; Genomics; History; Information retrieval; Laboratories; Proteomics; Publishing; XML;
fLanguage
English
Publisher
ieee
Conference_Titel
Bioinformatics and Bioengineering, 2003. Proceedings. Third IEEE Symposium on
Print_ISBN
0-7695-1907-5
Type
conf
DOI
10.1109/BIBE.2003.1188939
Filename
1188939
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