DocumentCode :
3321589
Title :
A novel laboratory version management system for tracking complex biological experiments
Author :
Shui, William M. ; Lam, Nicole ; Wong, Raymond K.
Author_Institution :
Sch. of Comput. Sci. & Eng., New South Wales Univ., Sydney, NSW, Australia
fYear :
2003
fDate :
10-12 March 2003
Firstpage :
133
Lastpage :
140
Abstract :
Ability to keep track of records for various biological experiments allows for future validation of the current experiments and other non-experimental laboratory procedures. With the increasing popularity of publishing biological data in XML format, there arises the need for the control and management of this data, as well as dynamically exporting this data to various formats for reporting purposes. As such data is constantly changing, users want to be able to query previous versions, plotting data across different versions from history, query changes in documents, as well as to retrieve a particular document version efficiently. This paper proposes an XML-based version management system for tracking and analyzing data obtained from any laboratory experiments in an effective and meaningful manner. This includes experiments ranging from genomic, proteomic and protein structural. We also present methods for importing non XML data into the system as well as generating reports in multiple formats dynamically.
Keywords :
biological techniques; biology computing; genetics; hypermedia markup languages; laboratory techniques; proteins; XML format; XML-based version management system; complex biological experiments tracking; documents changes query; genomic; laboratory version management system; protein structural experiments; proteomic; Bioinformatics; Biological control systems; Data analysis; Genomics; History; Information retrieval; Laboratories; Proteomics; Publishing; XML;
fLanguage :
English
Publisher :
ieee
Conference_Titel :
Bioinformatics and Bioengineering, 2003. Proceedings. Third IEEE Symposium on
Print_ISBN :
0-7695-1907-5
Type :
conf
DOI :
10.1109/BIBE.2003.1188939
Filename :
1188939
Link To Document :
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