DocumentCode
3379780
Title
Automated Detection and Analysis of Foraging Behavior in C. elegans
Author
Huang, Kuang-Man ; Cosman, Pamela ; Schafer, William R.
Author_Institution
Univ. of California at San Diego, La Jolla, CA
fYear
2008
fDate
24-26 March 2008
Firstpage
29
Lastpage
32
Abstract
Foraging is a rapid, side-to-side movement of the nose generated by C. elegans as it explores its environment. We present an automated method to detect and analyze foraging behavior in a video sequence. Morphological image processing methods are used to locate the nose position of the worm in each image. Then foraging events are detected by measuring the bending angle of the nose and analyzing it with periodograms. We measure foraging-related parameters which have not previously been studied. The algorithm can be used to characterize genetic mutations associated with this behavior.
Keywords
biology computing; genetics; image sequences; object detection; video signal processing; C. elegans; automated detection; foraging behavior; genetic mutations; morphological image processing; video sequence; Biological cells; Capacitive sensors; Computer worms; Event detection; Frequency; Gray-scale; Nervous system; Neurons; Nose; Optical microscopy;
fLanguage
English
Publisher
ieee
Conference_Titel
Image Analysis and Interpretation, 2008. SSIAI 2008. IEEE Southwest Symposium on
Conference_Location
Santa Fe, NM
Print_ISBN
978-1-4244-2296-8
Electronic_ISBN
978-1-4244-2297-5
Type
conf
DOI
10.1109/SSIAI.2008.4512277
Filename
4512277
Link To Document