• DocumentCode
    3394039
  • Title

    Bioinformatics: Implementation of a proposed upgraded Smith-Waterman algorithm for local alignment

  • Author

    Sadi, Md Shihabuddin ; Sami, A.Z.M. ; Ahmed, Imtiaz Uddin ; Ruhunnabi, Abdullahil Baki Md ; Das, Nirmalendu

  • Author_Institution
    Shah Jalal Univ. of Sci. & Technol., Sylhet, Bangladesh
  • fYear
    2009
  • fDate
    March 30 2009-April 2 2009
  • Firstpage
    87
  • Lastpage
    91
  • Abstract
    This paper presents a new algorithm for local alignment search which has less computational complexity than the Smith-Waterman algorithm. Increasing the accuracy of sequence matching and reducing computational complexity is a grand challenge to bioinformatics computing. The proposed Algorithm is a more competent local alignment searching Algorithm since it reduces running time well enough to search a database in order to find.
  • Keywords
    bioinformatics; bioinformatics; local alignment search; upgraded Smith-Waterman algorithm; Bioinformatics; Computational complexity; Databases; Filling; Finishing; Testing;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Computational Intelligence in Bioinformatics and Computational Biology, 2009. CIBCB '09. IEEE Symposium on
  • Conference_Location
    Nashville, TN
  • Print_ISBN
    978-1-4244-2756-7
  • Type

    conf

  • DOI
    10.1109/CIBCB.2009.4925712
  • Filename
    4925712
    • Link To Document
    https://search.isc.ac/dl/search/defaultta.aspx?DTC=49&DC=3394039