Title :
A novel discretization method for processing digital gene expression profiles
Author :
Jibin Qu ; Jinxia Zhang ; Chenyang Huang ; Baogui Xie ; Yong Wang ; Xiang-Sun Zhang
Author_Institution :
Inst. of Agric. Resources & Regional Planning, Chinese Acad. of Agric. Sci., Beijing, China
Abstract :
Discretization serves as an important preprocessing step for analyzing gene expression data and many algorithms have been proposed. However, most of the discretization methods were designed for microarrays. As a new technology, digital gene expression (DGE) profiles can overcome the limitation of microarrays and were applied in a widely range. In this paper, we proposed a novel discretization method for DGE data and the validations in a time-series gene expression dataset proved the efficiency of our method.
Keywords :
RNA; data analysis; genetics; molecular biophysics; molecular configurations; time series; RNA sequences; digital gene expression profile processing; gene expression data analysis; microarrays; novel discretization method; time-series gene expression dataset; Bioinformatics; Fitting; Genomics; Indexes;
Conference_Titel :
Systems Biology (ISB), 2013 7th International Conference on
Conference_Location :
Huangshan
DOI :
10.1109/ISB.2013.6623808