DocumentCode
3423405
Title
An efficient optimal leaf ordering for hierarchical clustering in microarray gene expression data analysis
Author
Zhang, Jianting ; Gruenwald, Le
Author_Institution
Sch. of Comput. Sci., Oklahoma Univ., Norman, OK, USA
fYear
2004
fDate
30 Aug.-3 Sept. 2004
Firstpage
396
Lastpage
400
Abstract
The objective of This work is to derive an efficient and optimal ordering method for genes produced by binary hierarchical clustering. The proposed method examines all possible 2n-1 orderings in O(n2) time complexity. Compared to the previously proposed methods, our proposed solution is efficient and optimal.
Keywords
biology computing; computational complexity; data analysis; genetics; pattern clustering; tree data structures; binary hierarchical clustering; data analysis; microarray gene expression; optimal leaf ordering method; time complexity; Bioinformatics; Clustering methods; Computer science; DNA; Data analysis; Data mining; Gene expression; Genomics; Inspection; Tree graphs;
fLanguage
English
Publisher
ieee
Conference_Titel
Database and Expert Systems Applications, 2004. Proceedings. 15th International Workshop on
ISSN
1529-4188
Print_ISBN
0-7695-2195-9
Type
conf
DOI
10.1109/DEXA.2004.1333506
Filename
1333506
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