• DocumentCode
    3423405
  • Title

    An efficient optimal leaf ordering for hierarchical clustering in microarray gene expression data analysis

  • Author

    Zhang, Jianting ; Gruenwald, Le

  • Author_Institution
    Sch. of Comput. Sci., Oklahoma Univ., Norman, OK, USA
  • fYear
    2004
  • fDate
    30 Aug.-3 Sept. 2004
  • Firstpage
    396
  • Lastpage
    400
  • Abstract
    The objective of This work is to derive an efficient and optimal ordering method for genes produced by binary hierarchical clustering. The proposed method examines all possible 2n-1 orderings in O(n2) time complexity. Compared to the previously proposed methods, our proposed solution is efficient and optimal.
  • Keywords
    biology computing; computational complexity; data analysis; genetics; pattern clustering; tree data structures; binary hierarchical clustering; data analysis; microarray gene expression; optimal leaf ordering method; time complexity; Bioinformatics; Clustering methods; Computer science; DNA; Data analysis; Data mining; Gene expression; Genomics; Inspection; Tree graphs;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Database and Expert Systems Applications, 2004. Proceedings. 15th International Workshop on
  • ISSN
    1529-4188
  • Print_ISBN
    0-7695-2195-9
  • Type

    conf

  • DOI
    10.1109/DEXA.2004.1333506
  • Filename
    1333506