Title :
Control theoretic modeling of a genetic switch
Author_Institution :
Ryerson Univ., Toronto, ON, Canada
Abstract :
The paper explores a control-theoretic approach to the modeling of a genetic switch associated with bacteriophage λ. The approach consists in modeling the underlying gene regulation mechanisms through the use of control theoretic abstractions of experimentally verified patterns and pathways of gene expression and repression, without resorting to the inclusion of detailed reaction kinetics. The proposed model is not intended to provide predictions of biochemical variables. Instead, the objective is to build a system-centric model of gene regulation dynamics that may be more suited for the analysis and understanding of biological functions. The reported simulation results provide an encouraging illustration of the stated objective´s attainability.
Keywords :
biochemistry; biocontrol; cellular biophysics; control theory; genetics; microorganisms; molecular biophysics; physiological models; bacteriophage λ; biochemical variables; control theoretic modeling; gene expression; gene regulation; gene repression; genetic switch; reaction kinetics; system centric model; Biological system modeling; Computational modeling; DNA; Proteins; Robustness; Switches; Control Theoretic Model; Gene Regulation; Genetic Switch;
Conference_Titel :
Electrical and Computer Engineering (CCECE), 2011 24th Canadian Conference on
Conference_Location :
Niagara Falls, ON
Print_ISBN :
978-1-4244-9788-1
Electronic_ISBN :
0840-7789
DOI :
10.1109/CCECE.2011.6030522