Title :
Towards Mining Frequent Patterns in Genome Wide Association
Author :
Mutalib, Sofianita ; Abdul-Rahman, Shuzlina ; Mohamed, Amr
Author_Institution :
Fac. of Comput. & Math. Sci., Univ. Teknol. MARA, Shah Alam, Malaysia
Abstract :
Frequent pattern mining (FPM) is a popular method in discovering knowledge through generating associations between the attributes in database. Frequent patterns (FPs) represent interesting relationship that could improve understanding the data. High throughput genomic datasets normally consists of a lot of hidden relationships that can be discovered. It is challenging to explore the relationship between genomic factors and the complex disease. To face the challenges of high dimensional dataset, we perform preliminary study in genome wide association data using frequent pattern mining.
Keywords :
biology computing; data mining; diseases; genomics; FPM; association generation; complex disease; database attributes; frequent pattern mining; genome wide association data; genomic factors; high dimensional dataset; high throughput genomic datasets; knowledge discovery; Bioinformatics; Data mining; Diseases; Genomics; Itemsets; Frequent Pattern Mining; GWAS; Row Enumeration; Single Nucleotide Polymorphism;
Conference_Titel :
Computational Science and Engineering (CSE), 2013 IEEE 16th International Conference on
Conference_Location :
Sydney, NSW
DOI :
10.1109/CSE.2013.159