DocumentCode
3491816
Title
An identification of secondary structure conserved elements in mammalian syntenic regions
Author
Mituyama, Toutai
Author_Institution
Comput. Biol. Res. Center, AIST, Tokyo, Japan
fYear
2011
fDate
2-4 Sept. 2011
Firstpage
379
Lastpage
381
Abstract
3,361 putative RNA secondary structure conserved regions were identified from mammalian syntenies by using leading-edge RNA sequence data analysis tools. The identified candidates are found to be concentrated in transcription factor binding sites of various genes, which infer secondary structure conserved elements play certain roles for transcription regulation.
Keywords
bioinformatics; biological techniques; genetics; macromolecules; molecular biophysics; molecular configurations; organic compounds; RNA secondary structure conserved regions; RNA sequence data analysis tools; mammalian syntenic regions; mammalian syntenies; secondary structure conserved element identification; transcription factor binding sites; transcription regulation; Bioinformatics; Encoding; Genomics; Humans; Mice; RNA; Thin film transistors; bioinformatics; ncRNA; secondary structure; synteny; transcription factor binding site;
fLanguage
English
Publisher
ieee
Conference_Titel
Systems Biology (ISB), 2011 IEEE International Conference on
Conference_Location
Zhuhai
Print_ISBN
978-1-4577-1661-4
Electronic_ISBN
978-1-4577-1665-2
Type
conf
DOI
10.1109/ISB.2011.6033182
Filename
6033182
Link To Document