Title :
Comparison of reconstruction algorithms in compressed sensing applied to biological imaging
Author :
Montagner, Yoann Le ; Angelini, Elsa ; Olivo-Marin, Jean-Christophe
Author_Institution :
Unite d´´Analyse d´´Images Quantitative, Inst. Pasteur, Paris, France
fDate :
March 30 2011-April 2 2011
Abstract :
In this paper, we propose a short presentation of the compressed sensing imaging framework, along with a review of recent applications in the biomedical imaging field. One of the critical issue that used to hinder the application of compressed sensing in a bioimaging context is the computational cost of the underlying image reconstruction process. However, some recently published algorithms manage to overcome this difficulty, leading to acceptable reconstruction computational times. We illustrate with simulations on biological images of fluorescence microscopy a comparison of three reconstruction algorithms, evaluating data fidelity and computational efficiency.
Keywords :
biomedical optical imaging; data analysis; data compression; fluorescence; image coding; image reconstruction; medical image processing; optical microscopy; biological imaging; compressed sensing; computational efficiency; data fidelity; fluorescence microscopy; reconstruction algorithms; Biomedical imaging; Compressed sensing; Image reconstruction; Minimization; Optimization; TV; Compressed sensing; Fourier transform; convex optimization; sampling pattern;
Conference_Titel :
Biomedical Imaging: From Nano to Macro, 2011 IEEE International Symposium on
Conference_Location :
Chicago, IL
Print_ISBN :
978-1-4244-4127-3
Electronic_ISBN :
1945-7928
DOI :
10.1109/ISBI.2011.5872365