• DocumentCode
    3519868
  • Title

    Multi-objective Particle Swarm Optimization Biclustering of Microarray Data

  • Author

    Liu, Junwan ; Li, Zhoujun ; Liu, Feifei ; Chen, Yiming

  • fYear
    2008
  • fDate
    3-5 Nov. 2008
  • Firstpage
    363
  • Lastpage
    366
  • Abstract
    With the advent of the DNA microarray technology,it is now possible to study the transcriptional response of a complete genome to different experimental conditions. Biclustering is a very useful data mining technique for analysis of those gene expression data.During biclustering several objectives in conflict with each other have to be optimized simultaneously, so multi-objective modeling is suitable for solving biclustering problem. This paper proposes a novel multi-objective particle swarm optimization biclustering (MOPSOB) algorithm to mine coherent patterns from microarray data. Experimental results on real datasets show that our approach can effectively find significant biclusters of high quality.
  • Keywords
    DNA; bioinformatics; data mining; molecular biophysics; particle swarm optimisation; pattern clustering; DNA microarray technology; data mining; gene expression data; genome; multiobjective particle swarm optimization biclustering; transcriptional response; Agricultural engineering; Bioinformatics; Biomedical computing; Birds; Computer science; DNA computing; Evolutionary computation; Forestry; Libraries; Particle swarm optimization;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Bioinformatics and Biomedicine, 2008. BIBM '08. IEEE International Conference on
  • Conference_Location
    Philadelphia, PA
  • Print_ISBN
    978-0-7695-3452-7
  • Type

    conf

  • DOI
    10.1109/BIBM.2008.17
  • Filename
    4684920