DocumentCode
3538531
Title
Computing mRNA and protein statistical moments for a renewal model of stochastic gene-expression
Author
Antunes, D. ; Singh, Ashutosh
Author_Institution
Dept. of Mech. Eng., Eindhoven Univ. of Technol., Eindhoven, Netherlands
fYear
2013
fDate
10-13 Dec. 2013
Firstpage
7199
Lastpage
7204
Abstract
The level of a given mRNA or protein exhibits significant variations from cell-to-cell across a homogenous population of living cells. Much work has focused on understanding the different sources of noise in the gene-expression process that drive this stochastic variability in gene-expression. Recent experiments tracking growth and division of individual cells reveal that cell division times have considerable intercellular heterogeneity. Here we investigate how randomness in the cell division times can create variability in population counts. We consider a model where mRNA/protein levels evolve according to a linear differential equation with cell divisions times spaced by independent and identically distributed random intervals. Whenever the cell divides the population of mRNA and protein is halved. Considering gamma distributed cell division intervals, we provide a method for computing the mean and variance of mRNA and protein levels and provide exact analytical formulas for the asymptotic values of these statistical moments. Computation of the statistical moments for physiologically relevant parameter values shows that randomness in the cell division process can be a major factor in driving difference in protein levels across a population of cells.
Keywords
RNA; biology computing; cellular biophysics; gamma distribution; linear differential equations; proteins; statistical analysis; stochastic processes; cell division process; cell divisions times; distributed random intervals; gamma distributed cell division intervals; individual cell division; individual cell growth tracking; intercellular heterogeneity; linear differential equation; mRNA computation; mRNA-protein levels; protein statistical moments; stochastic gene-expression renewal model; stochastic variability; Differential equations; Mathematical model; Protein engineering; Proteins; Sociology; Statistics; Stochastic processes;
fLanguage
English
Publisher
ieee
Conference_Titel
Decision and Control (CDC), 2013 IEEE 52nd Annual Conference on
Conference_Location
Firenze
ISSN
0743-1546
Print_ISBN
978-1-4673-5714-2
Type
conf
DOI
10.1109/CDC.2013.6761031
Filename
6761031
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