• DocumentCode
    3561190
  • Title

    Computational Mass Spectrometry in a Reconfigurable Coherent Coprocessing Architecture

  • Author

    Yalamarthy, Devi Sravanthi ; Coburn, Joel ; Gupta, Rajesh K. ; Edwards, Glen ; Kelly, Mark

  • Author_Institution
    Univ. of California, San Diego, La Jolla, CA, USA
  • Volume
    28
  • Issue
    4
  • fYear
    2011
  • Firstpage
    58
  • Lastpage
    67
  • Abstract
    The significant growth in the quantity of data in biology and related fields has spawned the need for novel computational solutions. The authors show how a key search task in proteomics, the large-scale study of proteins, can be accelerated by several orders of magnitude by the use of FPGA-based hardware.
  • Keywords
    biology computing; field programmable gate arrays; proteomics; reconfigurable architectures; FPGA-based hardware; biology; computational mass spectrometry; computational solution; key search task; proteomics; reconfigurable coherent coprocessing architecture; Accelerators; Central Processing Unit; Coprocessors; Databases; Field programmable gate arrays; Instruction sets; FPGA; coherent coprocessing; design and test; hardware accelerator; reconfigurable computing;
  • fLanguage
    English
  • Journal_Title
    Design Test of Computers, IEEE
  • Publisher
    ieee
  • Conference_Location
    5/12/2011 12:00:00 AM
  • ISSN
    0740-7475
  • Type

    jour

  • DOI
    10.1109/MDT.2011.47
  • Filename
    5765910
    • Link To Document
    https://search.isc.ac/dl/search/defaultta.aspx?DTC=49&DC=3561190