• DocumentCode
    3597012
  • Title

    Spot detection of complex regions by accumulated gradient in two dimensional electrophoresis images

  • Author

    Kim, Mi Ae ; Yoon, Young Woo

  • Author_Institution
    Dept. of Comput. Eng., Yeungnam Univ., Gyeongsan
  • Volume
    3
  • fYear
    2009
  • Firstpage
    1982
  • Lastpage
    1985
  • Abstract
    The 2-dimensional electrophoresis has dramatically contributed to the research on proteomics. We suggest a method to detect spots in complex regions in which many spots representing proteins are overlapped and saturated. In generally suggested methods, the complex region is detected as a spot or as incorrect spots. The method calculates accumulated gradients of the potentially complex regions, and segments the resulting accumulated gradient image with the watershed segmentation technique. In the experimental results, the suggested method has shown better and efficient result than existing method for spot separation, has detected more protein spots hidden in the 2-dimensional electrophoresis image.
  • Keywords
    biology computing; computer vision; image segmentation; proteomics; accumulated gradient image; complex regions spot detection; proteomics; two dimensional electrophoresis images; watershed segmentation technique; Electrokinetics; Equations; Gaussian processes; Image processing; Image segmentation; Information analysis; Medical treatment; Protein engineering; Proteomics; Shape; accumulated gradient; complex region; protein spot; spot detection; two-dimensional electrophoresis;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Advanced Communication Technology, 2009. ICACT 2009. 11th International Conference on
  • ISSN
    1738-9445
  • Print_ISBN
    978-89-5519-138-7
  • Electronic_ISBN
    1738-9445
  • Type

    conf

  • Filename
    4809467