DocumentCode
3600913
Title
The Multimodal Brain Tumor Image Segmentation Benchmark (BRATS)
Author
Menze, Bjoern H. ; Jakab, Andras ; Bauer, Stefan ; Kalpathy-Cramer, Jayashree ; Farahani, Keyvan ; Kirby, Justin ; Burren, Yuliya ; Porz, Nicole ; Slotboom, Johannes ; Wiest, Roland ; Lanczi, Levente ; Gerstner, Elizabeth ; Weber, Marc-Andre ; Arbel, Tal
Author_Institution
Dept. of Comput. Sci., Tech. Univ. Munchen, Munich, Germany
Volume
34
Issue
10
fYear
2015
Firstpage
1993
Lastpage
2024
Abstract
In this paper we report the set-up and results of the Multimodal Brain Tumor Image Segmentation Benchmark (BRATS) organized in conjunction with the MICCAI 2012 and 2013 conferences. Twenty state-of-the-art tumor segmentation algorithms were applied to a set of 65 multi-contrast MR scans of low- and high-grade glioma patients - manually annotated by up to four raters - and to 65 comparable scans generated using tumor image simulation software. Quantitative evaluations revealed considerable disagreement between the human raters in segmenting various tumor sub-regions (Dice scores in the range 74%-85%), illustrating the difficulty of this task. We found that different algorithms worked best for different sub-regions (reaching performance comparable to human inter-rater variability), but that no single algorithm ranked in the top for all sub-regions simultaneously. Fusing several good algorithms using a hierarchical majority vote yielded segmentations that consistently ranked above all individual algorithms, indicating remaining opportunities for further methodological improvements. The BRATS image data and manual annotations continue to be publicly available through an online evaluation system as an ongoing benchmarking resource.
Keywords
benchmark testing; biomedical MRI; brain; image segmentation; medical image processing; tumours; BRATS; Dice scores; MICCAI 2012 conference; MICCAI 2013 conference; Multimodal Brain Tumor Image Segmentation Benchmark; glioma patients; hierarchical majority vote; human interrater variability; multicontrast MR scans; tumor image simulation software; tumor segmentation algorithm; Benchmark testing; Biomedical imaging; Educational institutions; Image segmentation; Lesions; Benchmark; Brain; Image segmentation; MRI; Oncology/tumor;
fLanguage
English
Journal_Title
Medical Imaging, IEEE Transactions on
Publisher
ieee
ISSN
0278-0062
Type
jour
DOI
10.1109/TMI.2014.2377694
Filename
6975210
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