DocumentCode
3601370
Title
Model Order and Identifiability of Non-Linear Biological Systems in Stable Oscillation
Author
Wigren, Torbjorn
Author_Institution
Dept. of Inf. Technol., Uppsala Univ., Uppsala, Sweden
Volume
12
Issue
6
fYear
2015
Firstpage
1479
Lastpage
1484
Abstract
The paper presents a theoretical result that clarifies when it is at all possible to determine the nonlinear dynamic equations of a biological system in stable oscillation, from measured data. As it turns out the minimal order needed for this is dependent on the minimal dimension in which the stable orbit of the system does not intersect itself. This is illustrated with a simulated fourth order Hodgkin-Huxley spiking neuron model, which is identified using a non-linear second order differential equation model. The simulated result illustrates that the underlying higher order model of the spiking neuron cannot be uniquely determined given only the periodic measured data. The result of the paper is of general validity when the dynamics of biological systems in stable oscillation is identified, and illustrates the need to carefully address non-linear identifiability aspects when validating models based on periodic data.
Keywords
neurophysiology; nonlinear differential equations; nonlinear dynamical systems; oscillations; fourth order Hodgkin-Huxley spiking neuron model; identifiability; model order; nonlinear biological systems; nonlinear dynamic equations; nonlinear second order differential equation model; stable oscillation; Biological system modeling; Data models; Kalman filters; Mathematical model; Neurons; Numerical models; Oscillators; Identifiability; limit cycle; model order; non-linear systems; oscillations; system identification; systems biology;
fLanguage
English
Journal_Title
Computational Biology and Bioinformatics, IEEE/ACM Transactions on
Publisher
ieee
ISSN
1545-5963
Type
jour
DOI
10.1109/TCBB.2015.2404799
Filename
7044588
Link To Document