• DocumentCode
    3601370
  • Title

    Model Order and Identifiability of Non-Linear Biological Systems in Stable Oscillation

  • Author

    Wigren, Torbjorn

  • Author_Institution
    Dept. of Inf. Technol., Uppsala Univ., Uppsala, Sweden
  • Volume
    12
  • Issue
    6
  • fYear
    2015
  • Firstpage
    1479
  • Lastpage
    1484
  • Abstract
    The paper presents a theoretical result that clarifies when it is at all possible to determine the nonlinear dynamic equations of a biological system in stable oscillation, from measured data. As it turns out the minimal order needed for this is dependent on the minimal dimension in which the stable orbit of the system does not intersect itself. This is illustrated with a simulated fourth order Hodgkin-Huxley spiking neuron model, which is identified using a non-linear second order differential equation model. The simulated result illustrates that the underlying higher order model of the spiking neuron cannot be uniquely determined given only the periodic measured data. The result of the paper is of general validity when the dynamics of biological systems in stable oscillation is identified, and illustrates the need to carefully address non-linear identifiability aspects when validating models based on periodic data.
  • Keywords
    neurophysiology; nonlinear differential equations; nonlinear dynamical systems; oscillations; fourth order Hodgkin-Huxley spiking neuron model; identifiability; model order; nonlinear biological systems; nonlinear dynamic equations; nonlinear second order differential equation model; stable oscillation; Biological system modeling; Data models; Kalman filters; Mathematical model; Neurons; Numerical models; Oscillators; Identifiability; limit cycle; model order; non-linear systems; oscillations; system identification; systems biology;
  • fLanguage
    English
  • Journal_Title
    Computational Biology and Bioinformatics, IEEE/ACM Transactions on
  • Publisher
    ieee
  • ISSN
    1545-5963
  • Type

    jour

  • DOI
    10.1109/TCBB.2015.2404799
  • Filename
    7044588