• DocumentCode
    3607781
  • Title

    Accelerating bioinformatics applications via emerging parallel computing systems [Guest editorial]

  • Author

    Gomez-Pulido, Juan A. ; Schmidt, Bertil ; Feng, Wu-Chun

  • Author_Institution
    Department of Technologies of Computers and Communications, University of Extremadura, Caceres, Spain
  • Volume
    12
  • Issue
    5
  • fYear
    2015
  • Firstpage
    971
  • Lastpage
    972
  • Abstract
    The papers in this issue focus on advanced parallel computing systems for bioinformatics applications. This papers provide a forum to publish recent advances in the improvement of handling bioinformatics problems on emerging parallel computing systems. These systems can be characterized by exploiting different types of parallelism, including fine-grained versus coarse-grained and thread-level parallelism versus datalevel parallelism versus request-level parallelism. Hence, parallel computing systems based on multi- and many-core CPUs, many-core GPUs, vector processors, or FPGAs offer the promise to massively accelerate many bioinformatics algorithms and applications, ranging from computeintensive to data-intensive. Such computing systems are increasingly ubiquitous, ranging from ???big iron??? datacenter supercomputers and datacenter cloud computing down to GPU-accelerated smartphones and laptops.
  • Keywords
    Bioinformatics; Informatics; Parallel processig; Special issues and sections;
  • fLanguage
    English
  • Journal_Title
    Computational Biology and Bioinformatics, IEEE/ACM Transactions on
  • Publisher
    ieee
  • ISSN
    1545-5963
  • Type

    jour

  • DOI
    10.1109/TCBB.2015.2457736
  • Filename
    7293247