Title :
Evaluation of appropriateness of the score functions used in Multiple Sequence Alignments problem
Author :
Halit Ergezer;Kemal Leblebicioglu
Author_Institution :
Elektrik ve Elektronik M?hendisli?i B?l?m?, Orta Do?u Teknik ?niversitesi, Ankara, Turkey
fDate :
4/1/2008 12:00:00 AM
Abstract :
In this study, the effects of the scoring functions, which are used in multiple sequence alignment problem, to find the biologically meaningful alignment has been investigated. BALiBASE version 3 has been used as benchmark set. Results have been obtained by calculating score values for alignments in benchmark set and investigating whether the higher score is possible for benchmark alignment or not.
Keywords :
"Benchmark testing","Art","Proteins","Databases","Bioinformatics","Biology","Reactive power"
Conference_Titel :
Signal Processing, Communication and Applications Conference, 2008. SIU 2008. IEEE 16th
Print_ISBN :
978-1-4244-1998-2
DOI :
10.1109/SIU.2008.4632630
