• DocumentCode
    3646845
  • Title

    iSNP: An integrated, automatically updated SNP database

  • Author

    Levent Çarkacwğlu;Ceyhun Gedikoğlu;Yeşim Aydin Son

  • Author_Institution
    Bioinformatics Graduate Program, Middle East Technical University, 06800, Ankara, Turkey
  • fYear
    2012
  • fDate
    4/1/2012 12:00:00 AM
  • Firstpage
    114
  • Lastpage
    117
  • Abstract
    Single Nucleotide Polymorphisms (SNP) is a DNA sequence variation that occurs when a single nucleotide differs between members of a biological species or paired chromosomes in an individual. Studies on SNP data are important for scientists to shed light on identifying genetic variations underlying complex diseases. While recent advances in high-throughput genotyping technologies are resulting in data accumulation at large scales, the need for collection and service of this data under a standard format and globally normalized and structured metadata that houses the structured SNP data is becoming essential. Here, we present iSNP that is a regularly updated, machine curated database that holds SNP and its associated metadata from publicly available databases under a structured standard format that can be efficiently utilized within different applications.
  • Keywords
    "Databases","Bioinformatics","Genomics","Humans","Diseases"
  • Publisher
    ieee
  • Conference_Titel
    Health Informatics and Bioinformatics (HIBIT), 2012 7th International Symposium on
  • Print_ISBN
    978-1-4673-0879-3
  • Type

    conf

  • DOI
    10.1109/HIBIT.2012.6209052
  • Filename
    6209052