DocumentCode
3685006
Title
Quantification and automatized adaptive detection of in vivo and in vitro neuronal bursts based on signal complexity
Author
Fikret E. Kapucu;Jarno E. Mikkonen;Jarno M. A. Tanskanen;Jari A. K. Hyttinen
Author_Institution
Tampere University of Technology, Department of Electronics and Communications Engineering, Computational Biophysics and Imaging Group, BioMediTech, 33520, Finland
fYear
2015
Firstpage
4729
Lastpage
4732
Abstract
In this paper, we propose employing entropy values to quantify action potential bursts in electrophysiological measurements from the brain and neuronal cultures. Conventionally in the electrophysiological signal analysis, bursts are quantified by means of conventional measures such as their durations, and number of spikes in bursts. Here our main aim is to device metrics for burst quantification to provide for enhanced burst characterization. Entropy is a widely employed measure to quantify regularity/complexity of time series. Specifically, we investigate the applicability and differences of spectral entropy and sample entropy in the quantification of bursts in in vivo rat hippocampal measurements and in in vitro dissociated rat cortical cell culture measurement done with microelectrode arrays. For the task, an automatized and adaptive burst detection method is also utilized. Whereas the employed metrics are known from other applications, they are rarely employed in the assessment of burst in electrophysiological field potential measurements. Our results show that the proposed metrics are potential for the task at hand.
Keywords
"Entropy","In vitro","In vivo","Electrodes","Detection algorithms","Electric potential","Biological neural networks"
Publisher
ieee
Conference_Titel
Engineering in Medicine and Biology Society (EMBC), 2015 37th Annual International Conference of the IEEE
ISSN
1094-687X
Electronic_ISBN
1558-4615
Type
conf
DOI
10.1109/EMBC.2015.7319450
Filename
7319450
Link To Document