• DocumentCode
    3714520
  • Title

    Using aggregate taxonomies to summarize SNOMED CT evolution

  • Author

    Christopher Ochs;Yehoshua Perl;James Geller;Mark Musen

  • Author_Institution
    Department of Computer Science, New Jersey Institute of Technology, Newark, United States
  • fYear
    2015
  • Firstpage
    1008
  • Lastpage
    1015
  • Abstract
    Terminologies are typically large and complex knowledge systems. It is difficult to obtain an orientation into their structure and content. In previous research we designed compact summary networks called partial-area taxonomies to provide a structural summary of a terminology. The sizes of a terminology and of its partial-area taxonomy are defined as their numbers of nodes. While a partial-area taxonomy is typically smaller than the original terminology, it is often not compact enough to provide a clear “big picture,” due to too many nodes that summarize only a small number of terminology concepts. The display of such a partial-area taxonomy is still overwhelming. In this paper, we introduce a more compact summary of a terminology, called an aggregate taxonomy, obtained by aggregating small partial-area taxonomy nodes into larger nodes. We present a parametrized technique to study the design of such an aggregate taxonomy and apply it to the Specimen hierarchy of SNOMED CT. A software tool for creating and displaying aggregate taxonomies is described. We illustrate how aggregate taxonomies derived across multiple SNOMED CT releases can be used to summarize the evolution of the Specimen hierarchy´s content over eight years of SNOMED CT releases.
  • Keywords
    "Aggregates","Terminology","Software tools","Taxonomy"
  • Publisher
    ieee
  • Conference_Titel
    Bioinformatics and Biomedicine (BIBM), 2015 IEEE International Conference on
  • Type

    conf

  • DOI
    10.1109/BIBM.2015.7359822
  • Filename
    7359822