Title :
On Parameter Synthesis by Parallel Model Checking
Author :
Jiri Barnat;Lubos Brim;Adam Krejci;Adam Streck;David Safranek;Martin Vejnar;Tomas Vejpustek
Author_Institution :
Masaryk University, Brno
Abstract :
An important problem in current computational systems biology is to analyze models of biological systems dynamics under parameter uncertainty. This paper presents a novel algorithm for parameter synthesis based on parallel model checking. The algorithm is conceptually universal with respect to the modeling approach employed. We introduce the algorithm, show its scalability, and examine its applicability on several biological models.
Keywords :
"Biological system modeling","Computational modeling","Algorithm design and analysis","Cost accounting","Kinetic theory"
Journal_Title :
IEEE/ACM Transactions on Computational Biology and Bioinformatics
DOI :
10.1109/TCBB.2011.110