Title :
Automatic counting of immunocytochemically stained cells
Author :
Cosio, F. Arámbula ; Flores, J. A Márquez ; Castañeda, M. A Padilla ; Solano, S. ; Tato, P.
Author_Institution :
Image & Vision Lab, UNAM, Mexico, Mexico
Abstract :
In this work is described the development of an automatic color image segmentation and cell counting system for immunocytochemical analysis of stained tissue samples. The system is designed to automatically count the total number of positive and negative cells in tissue samples treated with cytokines DNA probes of pigs naturally parasitized with Taenia solium metacestodes and using in situ hybridization. The objectives of automatic counting are to improve the reproducibility of the analysis and the processing time of large image batches. A Bayes classifier was used for color image segmentation. Improved watershed segmentation combined with edge detection was used to isolate individual cells which are automatically labeled from the color segmented images. Preliminary results of 174 digital images are reported. The correlation coefficient of the automatic system with manual counting is 0.8 approx. Processing of each digital image takes 20 s on a SUN BLADE 2000.
Keywords :
Bayes methods; DNA; biochemistry; biological tissues; biomedical measurement; cellular biophysics; edge detection; image classification; image colour analysis; image segmentation; medical image processing; molecular biophysics; 20 s; Bayes classifier; Taenia solium metacestodes; automatic color image segmentation; cell counting; correlation coefficient; cytokines DNA probes; digital images; edge detection; immunocytochemical analysis; immunocytochemically stained cells; in situ hybridization; tissue samples; watershed segmentation; Blades; DNA; Digital images; Image analysis; Image color analysis; Image edge detection; Image segmentation; Probes; Reproducibility of results; Sun;
Conference_Titel :
Engineering in Medicine and Biology Society, 2003. Proceedings of the 25th Annual International Conference of the IEEE
Print_ISBN :
0-7803-7789-3
DOI :
10.1109/IEMBS.2003.1279883